Computational Biology and Informatics Lab at U.
Penn, creators of PaGE and RAD, housed in the Penn
Center for Bioinformatics.
National Medical Center hosts a web-based introduction to
microarrays and a multimedia lecture series.
Steven Johnson's resource for quantitative and real time PCR,
including a central repository for primer sets and reaction
Gene-Array discussion list.
NCGR and the Computational Genomics Group at the University of
California, Irvine, are participating in the GeneX™ Project
to provide an Internet-available repository of gene expression
data with an integrated toolset that will enable researchers to
analyze their data and compare their results with other such
The MGED group is a grass-roots movement whose goal is to
facilitate the adoption of standards for DNA-array experiment
annotation and data representation, as well as the introduction
of standard experimental controls and data normalization methods.
- Minimum Information About a Microarray Experiment.
MIAME aims to outline the minimum information required to
unambiguously interpret microarray data and to subsequently allow
independent verification of this data at a later stage if
- MAGE, a data exchange format and object model for
- The development of ontologies for
microarray experiment description and biological material
(biomaterial) annotation in particular, and
- The development of
recommendations regarding experimental controls and data
Papers, technical reports, talks and software for transcript
Terry Speed's Microarray Data Analysis Group. A statistician's
perspective on microarray analyses.
A number of free software tools for genomics, including
MultiExperiment Viewer, ArrayViewer and Spotfinder.
Gene Expression Omnibus. In order to support the public use and
dissemination of gene expression data, NCBI has launched the Gene
Expression Omnibus. GEO is a gene expression and hybridization
array data repository, as well as an online resource for the
retrieval of gene expression data from any organism or artificial
SNP Information Sources
PubMed (Penn Version)
Other University of Pennsylvania Facilities
Coriell Cell Repositories
Ensembl Genome Browser
Biomedical Research Core Facilities
Updated on 5/24/04
and Health Research Facilities
Molecular Pathology Laboratory